This is the development version of ginmappeR; for the stable release version, see ginmappeR.
Gene Identifier MapperBioconductor version: Development (3.22)
Provides functionalities to translate gene or protein identifiers between state-of-art biological databases: CARD (), NCBI Protein, Nucleotide and Gene (), UniProt () and KEGG ( ). Also offers complementary functionality like NCBI identical proteins or UniProt similar genes clusters retrieval.
Author: Fernando Sola [aut, cre] ORCID: 0000-0003-1685-3270 , Daniel Ayala [aut] ORCID: 0000-0003-2095-1009 , Marina Pulido [aut] ORCID: 0000-0003-1633-4294 , Rafael Ayala [aut] ORCID: 0000-0002-9332-4623 , Lorena López-Cerero [aut] ORCID: 0000-0001-8950-4384 , Inma Hernández [aut] ORCID: 0000-0001-8920-6635 , David Ruiz [aut] ORCID: 0000-0003-4460-5493
Maintainer: Fernando Sola <fsola at us.es>
Citation (from within R, entercitation("ginmappeR")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("ginmappeR")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ginmappeR")
Details biocViews Annotation, Genetics, KEGG, Software, ThirdPartyClient Version 1.5.0 In Bioconductor since BioC 3.19 (R-4.4) (1 year) License GPL-3 + file LICENSE Depends Imports KEGGREST, UniProt.ws, XML, rentrez, httr, utils, memoise, cachem, jsonlite, rvest System Requirements URL See More Package Archives
Follow Installation instructions to use this package in your R session.
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