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Bioconductor - ggtreeDendro (development version)

ggtreeDendro

This is the development version of ggtreeDendro; for the stable release version, see ggtreeDendro.

Drawing 'dendrogram' using 'ggtree'

Bioconductor version: Development (3.22)

Offers a set of 'autoplot' methods to visualize tree-like structures (e.g., hierarchical clustering and classification/regression trees) using 'ggtree'. You can adjust graphical parameters using grammar of graphic syntax and integrate external data to the tree.

Author: Guangchuang Yu [aut, cre, cph] ORCID: 0000-0002-6485-8781 , Shuangbin Xu [ctb] ORCID: 0000-0003-3513-5362 , Chuanjie Zhang [ctb]

Maintainer: Guangchuang Yu <guangchuangyu at gmail.com>

Citation (from within R, enter citation("ggtreeDendro")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ggtreeDendro")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ggtreeDendro")
Details See More Suggests aplot, cluster, knitr, MASS, mdendro, prettydoc, pvclust, rmarkdown, testthat (>= 3.0.0), treeio, yulab.utils Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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