This is the development version of geomeTriD; for the stable release version, see geomeTriD.
A R/Bioconductor package for interactive 3D plot of epigenetic data or single cell dataBioconductor version: Development (3.22)
geomeTriD (Three Dimensional Geometry Package) create interactive 3D plots using the GL library with the 'three.js' visualization library (https://threejs.org) or the rgl library. In addition to creating interactive 3D plots, the application also generates simplified models in 2D. These 2D models provide a more straightforward visual representation, making it easier to analyze and interpret the data quickly. This functionality ensures that users have access to both detailed three-dimensional visualizations and more accessible two-dimensional views, catering to various analytical needs.
Author: Jianhong Ou [aut, cre] ORCID: 0000-0002-8652-2488
Maintainer: Jianhong Ou <jou at morgridge.org>
Citation (from within R, entercitation("geomeTriD")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("geomeTriD")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("geomeTriD")Follow Installation instructions to use this package in your R session.
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