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Bioconductor - flowStats (development version)

flowStats

This is the development version of flowStats; for the stable release version, see flowStats.

Statistical methods for the analysis of flow cytometry data

Bioconductor version: Development (3.22)

Methods and functionality to analyse flow data that is beyond the basic infrastructure provided by the flowCore package.

Author: Florian Hahne, Nishant Gopalakrishnan, Alireza Hadj Khodabakhshi, Chao-Jen Wong, Kyongryun Lee

Maintainer: Greg Finak <greg at ozette.com>, Mike Jiang <mike at ozette.com>

Citation (from within R, enter citation("flowStats")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("flowStats")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowStats")
Details biocViews CellBasedAssays, FlowCytometry, ImmunoOncology, Software Version 4.21.0 In Bioconductor since BioC 2.4 (R-2.9) (16 years) License Artistic-2.0 Depends R (>= 3.0.2) Imports BiocGenerics, MASS, flowCore(>= 1.99.6), flowWorkspace, ncdfFlow(>= 2.19.5), flowViz, fda (>= 2.2.6), Biobase, methods, grDevices, graphics, stats, cluster, utils, KernSmooth, lattice, ks, RColorBrewer, rrcov, corpcor, mnormt, clue System Requirements URL http://www.github.com/RGLab/flowStats Bug Reports http://www.github.com/RGLab/flowStats/issues See More Suggests xtable, testthat, openCyto, ggcyto, ggridges Linking To Enhances RBGL, graph Depends On Me flowVS, highthroughputassays Imports Me Suggests Me cydar, flowClust, flowCore, flowTime, flowViz, ggcyto, openCyto Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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