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Bioconductor - bigmelon (development version)

bigmelon

This is the development version of bigmelon; for the stable release version, see bigmelon.

Illumina methylation array analysis for large experiments

Bioconductor version: Development (3.22)

Methods for working with Illumina arrays using gdsfmt.

Author: Tyler J. Gorrie-Stone [aut], Ayden Saffari [aut], Karim Malki [aut], Leonard C. Schalkwyk [cre, aut]

Maintainer: Leonard C. Schalkwyk <lschal at essex.ac.uk>

Citation (from within R, enter citation("bigmelon")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("bigmelon")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("bigmelon")
Details biocViews CpGIsland, DNAMethylation, DataImport, MethylationArray, Microarray, Preprocessing, QualityControl, Software, TwoChannel Version 1.35.0 In Bioconductor since BioC 3.4 (R-3.3) (8.5 years) License GPL-3 Depends R (>= 3.3), wateRmelon(>= 1.25.0), gdsfmt(>= 1.0.4), methods, minfi(>= 1.21.0), Biobase, methylumi Imports stats, utils, GEOquery, graphics, BiocGenerics, illuminaio System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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