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Bioconductor - Prostar (development version)

Prostar

This is the development version of Prostar; for the stable release version, see Prostar.

Provides a GUI for DAPAR

Bioconductor version: Development (3.22)

This package provides a GUI interface for the DAPAR package. The package Prostar (Proteomics statistical analysis with R) is a Bioconductor distributed R package which provides all the necessary functions to analyze quantitative data from label-free proteomics experiments. Contrarily to most other similar R packages, it is endowed with rich and user-friendly graphical interfaces, so that no programming skill is required.

Author: Thomas Burger [aut], Florence Combes [aut], Samuel Wieczorek [cre, aut]

Maintainer: Samuel Wieczorek <samuel.wieczorek at cea.fr>

Citation (from within R, enter citation("Prostar")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Prostar")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Prostar")
Details biocViews GUI, MassSpectrometry, Normalization, Preprocessing, Proteomics, Software Version 1.41.0 In Bioconductor since BioC 3.2 (R-3.2) (9.5 years) License Artistic-2.0 Depends R (>= 4.4.0) Imports DAPAR(>= 1.35.1), DAPARdata(>= 1.30.0), rhandsontable, data.table, shiny, shinyBS, shinyAce, highcharter, htmlwidgets, webshot, shinythemes, later, shinycssloaders, future, promises, shinyjqui, tibble, ggplot2, gplots, shinyjs, vioplot, Biobase, DT, R.utils, RColorBrewer, XML, colourpicker, gtools, markdown, rclipboard, sass, shinyTree, shinyWidgets System Requirements URL http://www.prostar-proteomics.org/ Bug Reports https://github.com/edyp-lab/Prostar/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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