This is the development version of DeepTarget; for the stable release version, see DeepTarget.
Deep characterization of cancer drugsBioconductor version: Development (3.22)
This package predicts a drugâs primary target(s) or secondary target(s) by integrating large-scale genetic and drug screens from the Cancer Dependency Map project run by the Broad Institute. It further investigates whether the drug specifically targets the wild-type or mutated target forms. To show how to use this package in practice, we provided sample data along with step-by-step example.
Author: Sanju Sinha [aut], Trinh Nguyen [aut, cre] ORCID: 0000-0002-6606-6948 , Ying Hu [aut]
Maintainer: Trinh Nguyen <tinh.nguyen at nih.gov>
Citation (from within R, entercitation("DeepTarget")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("DeepTarget")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DeepTarget")Follow Installation instructions to use this package in your R session.
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