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Bioconductor - ChIPsim (development version)

ChIPsim

This is the development version of ChIPsim; for the stable release version, see ChIPsim.

Simulation of ChIP-seq experiments

Bioconductor version: Development (3.22)

A general framework for the simulation of ChIP-seq data. Although currently focused on nucleosome positioning the package is designed to support different types of experiments.

Author: Peter Humburg

Maintainer: Peter Humburg <Peter.Humburg at gmail.com>

Citation (from within R, enter citation("ChIPsim")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ChIPsim")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ChIPsim")
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Follow Installation instructions to use this package in your R session.

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