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Showing content from https://www.bioconductor.org/packages/devel/bioc/html/../../bioc/html/CONFESS.html below:

Bioconductor - CONFESS (development version)

CONFESS

This is the development version of CONFESS; for the stable release version, see CONFESS.

Cell OrderiNg by FluorEScence Signal

Bioconductor version: Development (3.22)

Single Cell Fluidigm Spot Detector.

Author: Diana LOW and Efthimios MOTAKIS

Maintainer: Diana LOW <lowdiana at gmail.com>

Citation (from within R, enter citation("CONFESS")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("CONFESS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CONFESS")
Details biocViews CellBiology, Classification, Clustering, DataImport, GeneExpression, ImmunoOncology, QualityControl, RNASeq, Regression, Software, TimeCourse, Visualization Version 1.37.0 In Bioconductor since BioC 3.3 (R-3.3) (9 years) License GPL-2 Depends R (>= 3.3), grDevices, utils, stats, graphics Imports methods, changepoint, cluster, contrast, data.table (>= 1.9.7), ecp, EBImage, flexmix, flowCore, flowClust, flowMeans, flowMerge, flowPeaks, foreach, ggplot2, grid, limma, MASS, moments, outliers, parallel, plotrix, raster, readbitmap, reshape2, SamSPECTRAL, waveslim, wavethresh, zoo System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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