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Showing content from https://www.bioconductor.org/packages/devel/bioc/html/../../bioc/html/CNORfuzzy.html below:

Bioconductor - CNORfuzzy (development version)

CNORfuzzy

This is the development version of CNORfuzzy; for the stable release version, see CNORfuzzy.

Addon to CellNOptR: Fuzzy Logic

Bioconductor version: Development (3.22)

This package is an extension to CellNOptR. It contains additional functionality needed to simulate and train a prior knowledge network to experimental data using constrained fuzzy logic (cFL, rather than Boolean logic as is the case in CellNOptR). Additionally, this package will contain functions to use for the compilation of multiple optimization results (either Boolean or cFL).

Author: M. Morris, T. Cokelaer

Maintainer: T. Cokelaer <cokelaer at ebi.ac.uk>

Citation (from within R, enter citation("CNORfuzzy")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("CNORfuzzy")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CNORfuzzy")
Main vignette:Playing with networks using CNORfuzzyl PDF R Script Reference Manual PDF NEWS Text Details biocViews Network, Software Version 1.51.0 In Bioconductor since BioC 2.11 (R-2.15) (13 years) License GPL-2 Depends R (>= 2.15.0), CellNOptR(>= 1.4.0), nloptr (>= 0.8.5) Imports System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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