Showing content from https://www.bioconductor.org/packages/devel/bioc/html/../../bioc/html/../news/CNORfuzzy/NEWS below:
Changes in version 1.4.0 o cSimulator handles non integers values for the ihibitors and stimuli o gaDiscreteT1.R: fix issue when only 1 model was returned within tolerance o reduceFuzzy.R fix bug that causes seg faut (model was not cut properly) o defaultParametersFuzzy.R: added nTF to set number of TF to arbitrary value (not tested) o CNORwrapFuzzy.R: fixed pMutation argument that was not populated o gaDiscrete functions return best score as well in the dataframe. o output names of the fields returned by gaDiscrete are now using camel lower case so that plotFit from CellNoptR can be used o add C simulator Changes in version 0.99.8 o add NEWS.Rd in inst/ o move tests in inst/unitTests/ Changes in version 0.99.7 o USE CNOlist class from CellNOptR Changes in version 0.99.6 o REFACTORING ⢠emove indexList and simList where possible. ⢠use preprocessing function inside CNORwrapFuzzy ⢠CNOList argument renamed in CNOlist o CODE ⢠add hashtable in gaDiscrete useful for small model. Changes in version 0.99.5 o UNIFORMISATION of NAMES/ARGUMENTS ⢠made after the same uniformisation was done in CellNOptR 1.3.19 ⢠Update manual/vignettes accordingly Changes in version 0.99.4 o add computeScoreFuzzy function. Changes in version 0.99.3 o complete vignette. Changes in version 0.99.1 o complete manual Changes in version 0.99.0 o SIGNIFICANT USER-VISIBLE CHANGES ⢠CNORwrapFuzzy is the main user interface function. ⢠Tutorial completed o NEW FEATURES ⢠parameters of the optimisation procedure in getRefinedModel can be set by the user ⢠defaultParametersFuzzy ease the creation of a structure to handle all the parameters ⢠removed readMIDAS and makeCNOlist, which are now called directly from CellNOptR. Similarly, prep4simFuzzy calls CellNOptR prep4sim instead of rewritting it.
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