This is the development version of recount3; for the stable release version, see recount3.
Explore and download data from the recount3 projectBioconductor version: Development (3.22)
The recount3 package enables access to a large amount of uniformly processed RNA-seq data from human and mouse. You can download RangedSummarizedExperiment objects at the gene, exon or exon-exon junctions level with sample metadata and QC statistics. In addition we provide access to sample coverage BigWig files.
Author: Leonardo Collado-Torres [aut, cre] ORCID: 0000-0003-2140-308X
Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>
Citation (from within R, entercitation("recount3")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("recount3")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("recount3")Follow Installation instructions to use this package in your R session.
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