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Bioconductor - rSWeeP (development version)

rSWeeP

This is the development version of rSWeeP; for the stable release version, see rSWeeP.

Spaced Words Projection (SWeeP)

Bioconductor version: Development (3.22)

"Spaced Words Projection (SWeeP)" is a method for representing biological sequences using vectors preserving inter-sequence comparability.

Author: Camila Pereira Perico [com, cre, aut, cph] ORCID: 0000-0003-0186-4022 , Danrley Rafael Fernandes [aut], Mariane Gonçalves Kulik [aut] ORCID: 0009-0000-5432-3524 , Júlia Formighieri Varaschin [aut], Camilla Reginatto de Pierri [aut] ORCID: 0000-0002-6114-1734 , Ricardo Assunção Vialle [aut] ORCID: 0000-0003-3311-4197 , Roberto Tadeu Raittz [aut, cph] ORCID: 0000-0002-5271-991X

Maintainer: Camila P Perico <camilapp94 at gmail.com>

Citation (from within R, enter citation("rSWeeP")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("rSWeeP")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rSWeeP")
Details biocViews Software Version 1.21.0 In Bioconductor since BioC 3.11 (R-4.0) (5 years) License GPL (>= 2) Depends foreach, doParallel, parallel, Biostrings, methods, utils Imports tools, stringi System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.


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