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Bioconductor - powerTCR (development version)

powerTCR

This is the development version of powerTCR; for the stable release version, see powerTCR.

Model-Based Comparative Analysis of the TCR Repertoire

Bioconductor version: Development (3.22)

This package provides a model for the clone size distribution of the TCR repertoire. Further, it permits comparative analysis of TCR repertoire libraries based on theoretical model fits.

Author: Hillary Koch

Maintainer: Hillary Koch <hillary.koch01 at gmail.com>

Citation (from within R, enter citation("powerTCR")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("powerTCR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("powerTCR")
Details biocViews BiomedicalInformatics, Clustering, Software Version 1.29.0 In Bioconductor since BioC 3.7 (R-3.5) (7 years) License Artistic-2.0 Depends Imports cubature, doParallel, evmix, foreach, magrittr, methods, parallel, purrr, stats, truncdist, vegan, VGAM System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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