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Bioconductor - maser (development version)

maser

This is the development version of maser; for the stable release version, see maser.

Mapping Alternative Splicing Events to pRoteins

Bioconductor version: Development (3.22)

This package provides functionalities for downstream analysis, annotation and visualizaton of alternative splicing events generated by rMATS.

Author: Diogo F.T. Veiga [aut, cre]

Maintainer: Diogo F.T. Veiga <diogof.veiga at gmail.com>

Citation (from within R, enter citation("maser")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("maser")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("maser")
Details biocViews AlternativeSplicing, Software, Transcriptomics, Visualization Version 1.27.0 In Bioconductor since BioC 3.8 (R-3.5) (6.5 years) License MIT + file LICENSE Depends R (>= 3.5.0), ggplot2, GenomicRanges Imports dplyr, rtracklayer, reshape2, Gviz, DT, GenomeInfoDb, stats, utils, IRanges, methods, BiocGenerics, parallel, data.table System Requirements URL https://github.com/DiogoVeiga/maser Bug Reports https://github.com/DiogoVeiga/maser/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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