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Showing content from https://www.bioconductor.org/packages/devel/bioc/html/../../bioc/html/../../bioc/html/marray.html below:

Bioconductor - marray (development version)

marray

This is the development version of marray; for the stable release version, see marray.

Exploratory analysis for two-color spotted microarray data

Bioconductor version: Development (3.22)

Class definitions for two-color spotted microarray data. Fuctions for data input, diagnostic plots, normalization and quality checking.

Author: Yee Hwa (Jean) Yang <jeany at maths.usyd.edu.au> with contributions from Agnes Paquet and Sandrine Dudoit.

Maintainer: Yee Hwa (Jean) Yang <jean at biostat.ucsf.edu>

Citation (from within R, enter citation("marray")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("marray")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("marray")
Details See More Suggests tkWidgets Linking To Enhances Depends On Me CGHbase, convert, dyebias, MineICA, nnNorm, OLIN, RBM, stepNorm, TurboNorm, beta7, dyebiasexamples Imports Me arrayQuality, ChAMP, methylPipe, MSstats, MSstatsShiny, nnNorm, OLIN, OLINgui, piano, stepNorm, timecourse Suggests Me DEGraph, Mfuzz, hexbin Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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