This is the development version of mBPCR; for the stable release version, see mBPCR.
Bayesian Piecewise Constant Regression for DNA copy number estimationBioconductor version: Development (3.22)
It contains functions for estimating the DNA copy number profile using mBPCR with the aim of detecting regions with copy number changes.
Author: P.M.V. Rancoita <rancoita.paola at gmail.com>, with contributions from M. Hutter <marcus.hutter at anu.edu.au>
Maintainer: P.M.V. Rancoita <rancoita.paola at gmail.com>
Citation (from within R, entercitation("mBPCR")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("mBPCR")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("mBPCR")
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Follow Installation instructions to use this package in your R session.
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