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Showing content from https://www.bioconductor.org/packages/devel/bioc/html/../../bioc/html/../../bioc/html/limmaGUI.html below:

Bioconductor - limmaGUI (development version)

limmaGUI

This is the development version of limmaGUI; for the stable release version, see limmaGUI.

GUI for limma Package With Two Color Microarrays

Bioconductor version: Development (3.22)

A Graphical User Interface for differential expression analysis of two-color microarray data using the limma package.

Author: James Wettenhall [aut], Gordon Smyth [aut], Keith Satterley [ctb]

Maintainer: Gordon Smyth <smyth at wehi.edu.au>

Citation (from within R, enter citation("limmaGUI")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("limmaGUI")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("limmaGUI")
about.html HTML CustMenu.html HTML Extracting limma objects from limmaGUI files PDF import.html HTML index.html HTML InputFiles.html HTML lgDevel.html HTML limmaGUI Vignette PDF R Script LinModIntro.pdf PDF windowsFocus.html HTML Reference Manual PDF Details biocViews BatchEffect, Bayesian, DataImport, DifferentialExpression, GUI, GeneExpression, Microarray, MultipleComparison, Normalization, Preprocessing, QualityControl, Regression, Software, TimeCourse, TwoChannel, mRNAMicroarray Version 1.85.0 In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 20 years) License GPL (>=2) Depends Imports methods, grDevices, graphics, limma, R2HTML, tcltk, tkrplot, xtable, utils System Requirements URL http://bioinf.wehi.edu.au/limmaGUI/ See More Suggests Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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