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Bioconductor - gDR (development version)

gDR

This is the development version of gDR; for the stable release version, see gDR.

Umbrella package for R packages in the gDR suite

Bioconductor version: Development (3.22)

Package is a part of the gDR suite. It reexports functions from other packages in the gDR suite that contain critical processing functions and utilities. The vignette walks through the full processing pipeline for drug response analyses that the gDR suite offers.

Author: Allison Vuong [aut], Bartosz Czech [aut] ORCID: 0000-0002-9908-3007 , Arkadiusz Gladki [cre, aut] ORCID: 0000-0002-7059-6378 , Marc Hafner [aut] ORCID: 0000-0003-1337-7598 , Dariusz Scigocki [aut], Janina Smola [aut], Sergiu Mocanu [aut]

Maintainer: Arkadiusz Gladki <gladki.arkadiusz at gmail.com>

Citation (from within R, enter citation("gDR")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("gDR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("gDR")
Details See More Suggests BiocStyle, BumpyMatrix, futile.logger, gDRstyle(>= 1.7.1), gDRtestData(>= 1.7.1), kableExtra, knitr, markdown, purrr, rmarkdown, SummarizedExperiment, testthat, yaml Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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