This is the development version of HuBMAPR; for the stable release version, see HuBMAPR.
Interface to 'HuBMAP'Bioconductor version: Development (3.22)
'HuBMAP' provides an open, global bio-molecular atlas of the human body at the cellular level. The `datasets()`, `samples()`, `donors()`, `publications()`, and `collections()` functions retrieves the information for each of these entity types. `*_details()` are available for individual entries of each entity type. `*_derived()` are available for retrieving derived datasets or samples for individual entries of each entity type. Data files can be accessed using `bulk_data_transfer()`.
Author: Christine Hou [aut, cre] ORCID: 0009-0001-5350-0629 , Martin Morgan [aut] ORCID: 0000-0002-5874-8148 , Federico Marini [aut] ORCID: 0000-0003-3252-7758
Maintainer: Christine Hou <chris2018hou at gmail.com>
Citation (from within R, entercitation("HuBMAPR")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("HuBMAPR")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HuBMAPR")Follow Installation instructions to use this package in your R session.
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