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Bioconductor - Guitar (development version)

Guitar

This is the development version of Guitar; for the stable release version, see Guitar.

Guitar

Bioconductor version: Development (3.22)

The package is designed for visualization of RNA-related genomic features with respect to the landmarks of RNA transcripts, i.e., transcription starting site, start codon, stop codon and transcription ending site.

Author: Xiao Du, Hui Liu, Lin Zhang, Jia Meng

Maintainer: Jia Meng <jia.meng at xjtlu.edu.cn>

Citation (from within R, enter citation("Guitar")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Guitar")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Guitar")
Details biocViews Alignment, DataImport, MethylSeq, QualityControl, RNASeq, Sequencing, Software, SplicedAlignment, Transcription Version 2.25.0 In Bioconductor since BioC 3.2 (R-3.2) (9.5 years) License GPL-2 Depends GenomicFeatures, rtracklayer, AnnotationDbi, GenomicRanges, magrittr, ggplot2, methods, stats, utils, knitr, dplyr Imports System Requirements URL See More Suggests Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.


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