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Showing content from https://www.bioconductor.org/packages/devel/bioc/html/../../bioc/html/../../bioc/html/GLAD.html below:

Bioconductor - GLAD (development version)

GLAD

This is the development version of GLAD; for the stable release version, see GLAD.

Gain and Loss Analysis of DNA

Bioconductor version: Development (3.22)

Analysis of array CGH data : detection of breakpoints in genomic profiles and assignment of a status (gain, normal or loss) to each chromosomal regions identified.

Author: Philippe Hupe

Maintainer: Philippe Hupe <glad at curie.fr>

Citation (from within R, enter citation("GLAD")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("GLAD")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GLAD")
Details biocViews CopyNumberVariation, Microarray, Software Version 2.73.0 In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 20 years) License GPL-2 Depends R (>= 2.10) Imports aws System Requirements gsl. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'. URL http://bioinfo.curie.fr See More Package Archives

Follow Installation instructions to use this package in your R session.


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