This is the development version of EGAD; for the stable release version, see EGAD.
Extending guilt by association by degreeBioconductor version: Development (3.22)
The package implements a series of highly efficient tools to calculate functional properties of networks based on guilt by association methods.
Author: Sara Ballouz [aut, cre], Melanie Weber [aut, ctb], Paul Pavlidis [aut], Jesse Gillis [aut, ctb]
Maintainer: Sara Ballouz <sarahballouz at gmail.com>
Citation (from within R, entercitation("EGAD")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("EGAD")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation Details biocViews FunctionalGenomics, FunctionalPrediction, GenePrediction, GraphAndNetwork, Network, NetworkEnrichment, Software, SystemsBiology Version 1.37.0 In Bioconductor since BioC 3.3 (R-3.3) (9 years) License GPL-2 Depends R (>= 3.5) Imports gplots, Biobase, GEOquery, limma, impute, RColorBrewer, zoo, igraph, plyr, MASS, RCurl, methods System Requirements URL See More Package ArchivesFollow Installation instructions to use this package in your R session.
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