A RetroSearch Logo

Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Search Query:

Showing content from https://www.bioconductor.org/packages/devel/bioc/html/../../bioc/html/../../bioc/html/BioCor.html below:

Bioconductor - BioCor (development version)

BioCor

This is the development version of BioCor; for the stable release version, see BioCor.

Functional similarities

Bioconductor version: Development (3.22)

Calculates functional similarities based on the pathways described on KEGG and REACTOME or in gene sets. These similarities can be calculated for pathways or gene sets, genes, or clusters and combined with other similarities. They can be used to improve networks, gene selection, testing relationships...

Author: Lluís Revilla Sancho [aut, cre] ORCID: 0000-0001-9747-2570 , Pau Sancho-Bru [ths] ORCID: 0000-0001-5569-9259 , Juan José Salvatella Lozano [ths] ORCID: 0000-0001-7613-3908

Maintainer: Lluís Revilla Sancho <lluis.revilla at gmail.com>

Citation (from within R, enter citation("BioCor")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BioCor")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BioCor")
Details biocViews Clustering, GeneExpression, Network, NetworkEnrichment, Pathways, Software, StatisticalMethod, SystemsBiology Version 1.33.1 In Bioconductor since BioC 3.5 (R-3.4) (8 years) License MIT + file LICENSE Depends R (>= 3.4.0) Imports BiocParallel, GSEABase, Matrix, methods System Requirements URL https://bioconductor.org/packages/BioCor https://llrs.github.io/BioCor/ Bug Reports https://github.com/llrs/BioCor/issues See More Suggests airway, BiocStyle, boot, DESeq2, ggplot2 (>= 3.4.1), GOSemSim, Hmisc, knitr (>= 1.35), org.Hs.eg.db, reactome.db, rmarkdown, spelling, testthat (>= 3.0.0), WGCNA Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4