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Bioconductor - polyester

polyester

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see polyester.

Simulate RNA-seq reads

Bioconductor version: 3.10

This package can be used to simulate RNA-seq reads from differential expression experiments with replicates. The reads can then be aligned and used to perform comparisons of methods for differential expression.

Author: Alyssa C. Frazee, Andrew E. Jaffe, Rory Kirchner, Jeffrey T. Leek

Maintainer: Jack Fu <jmfu at jhsph.edu>, Jeff Leek <jtleek at gmail.com>

Citation (from within R, enter citation("polyester")): Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("polyester")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("polyester")
The Polyester package for simulating RNA-seq reads HTML R Script Reference Manual PDF NEWS Text Details See More Suggests knitr, ballgown Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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