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2d density chart

This section explains how to build a 2d density chart or a 2d histogram with python. Those chart types allow to visualize the combined distribution of two quantitative variables. They can be build with Matplotlib or Seaborn.

💡 What is a 2D density chart?

There are several chart types allowing to visualize the distribution of a combination of 2 numeric variables. They always have a variable represented on the X axis, the other on the Y axis, like for a scatterplot (left).

Then the number of observations within a particular area of the 2D space is counted and represented with a color gradient. The shape can vary: hexagones result in a hexbin chart, squares in a 2d histogram. A kernel density estimate can be used to get a 2d density plots or a contour plots

Confusing? Visit data-to-viz to clarify..

Contour plot with Seaborn

The contour plot can be easily built thanks to the kdeplot() function of the Seaborn library.

2D histogram with Matplotlib

Build a 2d histogram thanks to the hist2d() function of the Matplotlib library. Do not forget to play with the bins argument to find the value representing the best your data.

Hexbin chart with Matplotlib

Split the graph area in hexagones and you get a hexbin density chart. This time, it is matplotlib that gets you covered thanks to its hexbin() function.

2d density chart with Matplotlib

2D densities are computed thanks to the gaussian_kde() function and plotted thanks with the pcolormesh() function of matplotlib().

2d density and marginal plots

2D densities often combined with marginal distributions. It helps to highlight the distribution of both variables individually. It is pretty straightforward to add thanks to the jointplot() function of the Seaborn library.


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