Amberg DC, Burke DJ, Strathern JN (2005) Methods in yeast genetics: a Cold Spring Harbor Laboratory course manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, pp 149–152, 199–202

Google Scholar 

Belinchon MM, Gancedo JM (2003) Xylose and some non-sugar carbon sources cause catabolite repression in Saccharomyces cerevisiae. Arch Microbiol 180:293–297

Article  CAS  PubMed  Google Scholar 

Brachmann CB, Davies A, Cost GJ, Caputo E, Li J, Hieter P, Boeke JD (1998) Designer deletion strains derived from Saccharomyces cerevisiae S288C: A useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast 14:115–132

Article  CAS  PubMed  Google Scholar 

Christianson TW, Sikorski RS, Dante M, Shero JH, Hieter P (1992) Multifunctional yeast high-copy-number shuttle vectors. Gene 110:119–122

Article  CAS  PubMed  Google Scholar 

Gardonyi M, Osterberg M, Rodrigues C, Spencer-Martins I, Hahn-Hägerdal B (2003) High capacity xylose transport in Candida intermedia PYCC 4715. FEMS Yeast Res 3:45–52

CAS  PubMed  Google Scholar 

Gietz RD, Schiestl RH (2007) High-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method. Nat Protoc 2:31–34

Article  CAS  PubMed  Google Scholar 

Govindaswamy S, Vane LM (2007) Kinetics of growth and ethanol production on different carbon substrates using genetically engineered xylose-fermenting yeast. Bioresour Technol 98:677–685

Article  CAS  PubMed  Google Scholar 

Hahn-Hägerdasl B, Karhumaa K, Fonseca C, Spencer-Martins I, Gorwa-Grauslund MF (2007) Towards industrial pentose-fermenting yeast strains. Appl Microbiol Biotechnol 74:937–953

Article  Google Scholar 

Hamacher T, Becker J, Gardonyi M, Hahn-Hägerdal B, Boles E (2002) Characterization of the xylose-transporting properties of yeast hexose transporters and their influence on xylose utilization. Microbiology 148:2783–2788

Article  CAS  PubMed  Google Scholar 

Hartwig M (2008) News release: 2007 final ethanol production and demand. Renewable Fuels Association

Ho NW, Chen Z, Brainard AP (1998) Genetically engineered Saccharomyces yeast capable of effective cofermentation of glucose and xylose. Appl Environ Microbiol 64:1852–1859

Article  CAS  PubMed  PubMed Central  Google Scholar 

Jeffries TW (2006) Engineering yeasts for xylose metabolism. Curr Opin Biotechnol 17:320–326

Article  CAS  PubMed  Google Scholar 

Jin YS, Laplaza JM, Jeffries TW (2004) Saccharomyces cerevisiae engineered for xylose metabolism exhibits a respiratory response. Appl Environ Microbiol 70:6816–6825

Article  CAS  PubMed  PubMed Central  Google Scholar 

Johnson DA, Thomas MA (2007) The monosaccharide transporter gene family in Arabidopsis and rice: a history of duplications, adaptive evolution, and functional divergence. Mol Biol Evol 24:2412–2423

Article  CAS  PubMed  Google Scholar 

Kilian SG, Uden N (1988) Transport of xylose and glucose in the xylose-fermenting yeast Pichia stipitis. Appl Microbiol Biotechnol 27:545–548

Article  CAS  Google Scholar 

Kötter P, Ciriacy M (1993) Xylose fermentation by Saccharomyces cerevisiae. Appl Microbiol Biotechnol 38:776–783

Article  Google Scholar 

Kuyper M, Hartog MM, Toirkens MJ, Almering MJ, Winkler AA, van Dijken JP, Pronk JT (2005a) Metabolic engineering of a xylose-isomerase-expressing Saccharomyces cerevisiae strain for rapid anaerobic xylose fermentation. FEMS Yeast Res 5:399–409

Article  CAS  PubMed  Google Scholar 

Kuyper M, Toirkens MJ, Diderich JA, Winkler AA, van Dijken JP, Pronk JT (2005b) Evolutionary engineering of mixed-sugar utilization by a xylose-fermenting Saccharomyces cerevisiae strain. FEMS Yeast Res 5:925–934

Article  CAS  PubMed  Google Scholar 

Lagunas R (1993) Sugar transport in Saccharomyces cerevisiae. FEMS Microbiol Rev 10:229–242

Article  CAS  PubMed  Google Scholar 

Leandro MJ, Goncalves P, Spencer-Martins I (2006) Two glucose/xylose transporter genes from the yeast Candida intermedia: first molecular characterization of a yeast xylose–H⁺ symporter. Biochem J 395:543–549

Article  CAS  PubMed  PubMed Central  Google Scholar 

Ozcan S, Johnston M (1999) Function and regulation of yeast hexose transporters. Microbiol Mol Biol Rev 63:554–569

Article  CAS  PubMed  PubMed Central  Google Scholar 

Rudolf A, Baudel H, Zacchi G, Hahn-Hägerdal B, Liden G (2008) Simultaneous saccharification and fermentation of steam-pretreated bagasse using Saccharomyces cerevisiae TMB3400 and Pichia stipitis CBS6054. Biotechnol and Bioeng 99:783–790

Article  CAS  Google Scholar 

Saha BC (2003) Hemicellulose bioconversion. J Ind Microbiol Biotechnol 30:279–291

Article  CAS  PubMed  Google Scholar 

Salusjarvi L, Kankainen M, Soliymani R, Pitkanen JP, Penttila M, Ruohonen L (2008) Regulation of xylose metabolism in recombinant Saccharomyces cerevisiae. Microb Cell Fact 7:18

Article  PubMed  PubMed Central  Google Scholar 

Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual, 3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York

Google Scholar 

Sauer N, Stolz J (1994) SUC1 and SUC2: two sucrose transporters from Arabidopsis thaliana; expression and characterization in baker’s yeast and identification of the histidine-tagged protein. Plant J 6:67–77

Article  CAS  PubMed  Google Scholar 

Schneidereit A, Scholz-Starke J, Buttner M (2003) Functional characterization and expression analyses of the glucose-specific AtSTP9 monosaccharide transporter in pollen of Arabidopsis. Plant Physiol 133:182–190

Article  CAS  PubMed  PubMed Central  Google Scholar 

Sedlak M, Ho NW (2004) Characterization of the effectiveness of hexose transporters for transporting xylose during glucose and xylose co-fermentation by a recombinant Saccharomyces yeast. Yeast 21:671–684

Article  CAS  PubMed  Google Scholar 

Stambuk BU, Franden MA, Singh A, Zhang M (2003) D-Xylose transport by Candida succiphila and Kluyveromyces marxianus. Appl Biochem Biotechnol 105–108:255–263

Article  PubMed  Google Scholar 

Stolz J, Stadler R, Opekarova M, Sauer N (1994) Functional reconstitution of the solubilized Arabidopsis thaliana STP1 monosaccharide–H⁺ symporter in lipid vesicles and purification of the histidine tagged protein from transgenic Saccharomyces cerevisiae. Plant J 6:225–233

Article  CAS  PubMed  Google Scholar 

Truernit E, Stadler R, Baier K, Sauer N (1999) A male gametophyte-specific monosaccharide transporter in Arabidopsis. Plant J 17:191–201

Article  CAS  PubMed  Google Scholar 

Wahlbom CF, Cordero Otero RR, van Zyl WH, Hahn-Hägerdal B, Jonsson LJ (2003) Molecular analysis of a Saccharomyces cerevisiae mutant with improved ability to utilize xylose shows enhanced expression of proteins involved in transport, initial xylose metabolism, and the pentose phosphate pathway. Appl Environ Microbiol 69:740–746

Article  CAS  PubMed  PubMed Central  Google Scholar 

Wyman CE (1994) Ethanol from lignocellulosic biomass: technology, economics, and opportunities. Bioresour Technol 50:3–15

Article  CAS  Google Scholar