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Laboratory of Variant Analysis Tools · GitHub

Dr. Bo Peng's Bioinformatic Tools for Variant Analysis

1. SoS workflow system for daily data analysis

   Python 279 47

2. Multi-language Jupyter Notebook

   CSS 187 18

3. software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis

   C 31 4

4. Jupyterlab extension for SoS Polyglot Notebook and Workflow Engine, allows multiple kernels in one notebook

   TypeScript 75 8

5. A markdown kernel for Jupyter

   Python 24 2

6. A JupyterLab extension that displays transient display messages in console window

   TypeScript 6

• jupyterlab-sos Public

  Jupyterlab extension for SoS Polyglot Notebook and Workflow Engine, allows multiple kernels in one notebook

  vatlab/jupyterlab-sos’s past year of commit activity
• sos Public

  SoS workflow system for daily data analysis

  vatlab/sos’s past year of commit activity
• vatlab/sos-notebook’s past year of commit activity
• vatlab/codemirror-sos’s past year of commit activity TypeScript 0 MIT 0 2 0 Updated Oct 6, 2024
• transient-display-data Public

  A JupyterLab extension that displays transient display messages in console window

  vatlab/transient-display-data’s past year of commit activity TypeScript 6 BSD-3-Clause 0 2 1 Updated Sep 3, 2024
• vatlab/sos-docs’s past year of commit activity
• sos-pbs Public

  PBS task engine for SoS

  vatlab/sos-pbs’s past year of commit activity Python 1 BSD-3-Clause 1 5 0 Updated Apr 14, 2024
• sos-python Public

  SoS extension for Python2 and Python3

  vatlab/sos-python’s past year of commit activity Python 0 BSD-3-Clause 2 0 0 Updated Oct 11, 2023
• sos-r Public

  SoS extension for R

  vatlab/sos-r’s past year of commit activity
• sos-matlab Public

  SoS extension for Matlab and Octave

  vatlab/sos-matlab’s past year of commit activity Python 2 BSD-3-Clause 3 2 0 Updated Aug 3, 2023

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