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Showing content from https://github.com/stuart-lab/signac/issues/1459 below:

Is it possible to only plot links for one gene within a genomic region? · Issue #1459 · stuart-lab/signac · GitHub

Hello!

I am hoping there is a way to plot any and all links to one gene within a genomic region. When I set the region within LinkPlots(), it plots all links to all genes within those coordinates -- which can be a LOT and it is hard to distinguish the gene of interest and its specific links. If I use the gene name for the region argument, it only plots links within gene and omits the distal links.

I really appreciate your help with this!

Thank you,
Josephine


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