Python client for the GBIF API
Source on GitHub at gbif/pygbif
Other GBIF clients:
Contributing: CONTRIBUTING.md
Stable from pypi
Development version
[sudo] pip install git+git://github.com/gbif/pygbif.git#egg=pygbif
pygbif is split up into modules for each of the major groups of API methods.
You can import the entire library, or each module individually as needed.
In addition there is a utils module, currently with one method: wkt_rewind, and a caching method to manage whether HTTP requests are cached or not. See ?pygbif.caching.
registry module API:
Example usage:
from pygbif import registry registry.dataset_metrics(uuid='3f8a1297-3259-4700-91fc-acc4170b27ce')
species module API:
Example usage:
from pygbif import species species.name_suggest(q='Puma concolor')
occurrences module API:
Example usage:
from pygbif import occurrences as occ
occ.search(taxonKey = 3329049)
occ.get(key = 252408386)
occ.count(isGeoreferenced = True)
occ.download('basisOfRecord = PRESERVED_SPECIMEN')
occ.download('taxonKey = 3119195')
occ.download('decimalLatitude > 50')
occ.download_list(user = "sckott", limit = 5)
occ.download_meta(key = "0000099-140929101555934")
occ.download_get("0000066-140928181241064")
occ.download_citation("0002526-241107131044228")
occ.download_describe("simpleCsv")
occ.download_sql("SELECT gbifid,countryCode FROM occurrence WHERE genusKey = 2435098")
maps module API:
Example usage:
from pygbif import maps
out = maps.map(taxonKey = 212, year = 1998, bin = "hex",
hexPerTile = 30, style = "classic-noborder.poly")
out.response
out.path
out.img
out.plot()
utils module API:
Example usage:
from pygbif import utils x = 'POLYGON((144.6 13.2, 144.6 13.6, 144.9 13.6, 144.9 13.2, 144.6 13.2))' utils.wkt_rewind(x)
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