rbi.helpers is collection of helper functions to use with rbi, an R interface to LibBi, a library for Bayesian Inference.
It contains:
adapt_proposal
, to adapt the proposal distribution of a model according to the empirical standard deviations of accepted parametersadapt_particles
, to adapt the number of particles at a given point in parameter space.DIC
, to compute the DIC of a pMCMC runacceptance_rate
, to calculate the acceptance rate of a pMCMC runThe easiest way to install rbi.helpers
is to use the remotes
package:
# install.packages("remotes") remotes::install_github("sbfnk/rbi.helpers")About
Helper functions for inference with LibBi. Building on the rbi library.
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