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Showing content from https://github.com/samtools/samtools/issues/2111 below:

consensus docs 1:1 coordinate correspondence inaccurate? · Issue #2111 · samtools/samtools · GitHub

Hi! Thanks for the recent work on consensus - it is great. I'm wondering if the docs (accessed Sep 12, 2024) could be improved on this line:

This post (and my reasoning) would suggest that --show-del yes is also needed in the command: #1806 (comment)

Thanks!


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