As the docs state
‘warn’, raise a warning when a bad line is encountered and skip that line.
In [4]: pd.read_csv(StringIO(data), on_bad_lines="warn")
Skipping line 3: expected 1 fields, saw 3
Skipping line 5: expected 1 fields, saw 3
Out[4]:
a
0 1
1 4
Since it's not a Python warning it cannot be handled with the warnings module per se.
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