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Showing content from https://github.com/neurogenomics/templateR below:

neurogenomics/templateR: Self-updating template for developing R packages.




Authors: yourGivenName yourFamilyName README updated: Aug-03-2025

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If you use the templateR R package template, or any of the rworkflows suite tools, please cite:

Brian M. Schilder, Alan E. Murphy, & Nathan G. Skene (2023) The rworkflows suite: automated continuous integration for quality checking, documentation website creation, and containerised deployment of R packages, Research Square; https://doi.org/10.21203/rs.3.rs-2399015/v1

templateR is a template designed to make developing new R packages easy by providing:

To get started, simply click on the green Use this template button at the top right of the templateR repo.

To use certain features of rworkflows, you may need to set up one or more GitHub Secrets:

The GitHub Actions workflows included in this template will automatically create a documentation website for your package via GitHub Pages.

After the rworkflows action has successfully run on Ubuntu for the first time, a new branch will appear in your repo called “gh-pages”.

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If you use templateR, please cite:

author1, author2, author3 (publicationYear) articleTitle, journalName; volumeNumber, linkToPublication

if(!require("BiocManager")) install.packages("BiocManager")

BiocManager::install("neurogenomics/templateR")
library(templateR)
## R version 4.4.2 (2024-10-31)
## Platform: aarch64-apple-darwin20
## Running under: macOS Sequoia 15.5
## 
## Matrix products: default
## BLAS:   /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRblas.0.dylib 
## LAPACK: /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRlapack.dylib;  LAPACK version 3.12.0
## 
## locale:
## [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
## 
## time zone: America/New_York
## tzcode source: internal
## 
## attached base packages:
## [1] stats     graphics  grDevices utils     datasets  methods   base     
## 
## loaded via a namespace (and not attached):
##  [1] gtable_0.3.6        jsonlite_2.0.0      renv_1.1.5         
##  [4] dplyr_1.1.4         compiler_4.4.2      BiocManager_1.30.26
##  [7] tidyselect_1.2.1    dichromat_2.0-0.1   rvcheck_0.2.1      
## [10] scales_1.4.0        yaml_2.3.10         fastmap_1.2.0      
## [13] here_1.0.1          ggplot2_3.5.2       R6_2.6.1           
## [16] generics_0.1.4      knitr_1.50          yulab.utils_0.2.0  
## [19] tibble_3.3.0        desc_1.4.3          dlstats_0.1.7      
## [22] rprojroot_2.1.0     pillar_1.11.0       RColorBrewer_1.1-3 
## [25] rlang_1.1.6         badger_0.2.5        xfun_0.52          
## [28] fs_1.6.6            cli_3.6.5           magrittr_2.0.3     
## [31] rworkflows_1.0.6    digest_0.6.37       grid_4.4.2         
## [34] rstudioapi_0.17.1   lifecycle_1.0.4     vctrs_0.6.5        
## [37] evaluate_1.0.4      glue_1.8.0          data.table_1.17.8  
## [40] farver_2.1.2        rmarkdown_2.29      tools_4.4.2        
## [43] pkgconfig_2.0.3     htmltools_0.5.8.1

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