CRI-MAP is (old) software for linkage map construction with data on pedigrees. The version 2.4 (1990-03-26) code taken from http://compgen.rutgers.edu/crimap (in particular http://compgen.rutgers.edu/downloads/crimap.source.zip) with a few small changes to get it to compile with gcc version 11.3.0.
Documentation at https://saf.bio.caltech.edu/saf_manuals/crimap-doc.html.
Compile the software with:
Made the following changes to get it to compile:
In e_ped.c, added argument to calls to exit()
In our_allo.c and our_orde.c, moved definition of morecore to earlier in the file
In defs.h, changed typedef INT from int to long
Adjusted a bunch of parameters in defs.h, e_conv.c, and e_crimap.c
In e_crimap.c, changed print statements to print estimated map with greater precision
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