I got stuck in this error when installing the package
g++ -std=c++14 -I/opt/microsoft/ropen/3.5.2/lib64/R/include -DNDEBUG -I../inst/include/ -DU_STATIC_IMPLEMENTATION -I"/opt/microsoft/ropen/3.5.2/lib64/R/library/Rcpp/include" -I"/home/schen/R/x86_64-pc-linux-gnu-library/3.5/RcppThread/include" -Wno-unused-variable -Wno-unused-function -fPIC -c importExportMPZ.cpp -o importExportMPZ.o
-L/opt/microsoft/ropen/3.5.2/lib64/R/lib -o RcppAlgos.so CombPermUtils.o Combinatorics.o CountGmp.o DivNumSieve.o NthResult.o PollardRho.o Primes.o RcppExports.o SampCombPerm.o importExportMPZ.o -lgmp -L/opt/microsoft/ropen/3.5.2/lib64/R/lib -lR
/opt/microsoft/ropen/3.5.2/lib64/R/share/make/shlib.mk:6: recipe for target 'RcppAlgos.so' failed
Error in i.p(...) :
(converted from warning) installation of package ‘/tmp/RtmpU81uWD/file2734a21c3bf/RcppAlgos_2.3.4.tar.gz’ had non-zero exit status
This is the shlib.mk file:
## ${R_HOME}/share/make/shlib.mk
all: $(SHLIB)
$(SHLIB): $(OBJECTS)
@if test "z$(OBJECTS)" != "z"; then \
echo $(SHLIB_LINK) -o $@ $(OBJECTS) $(ALL_LIBS); \
$(SHLIB_LINK) -o $@ $(OBJECTS) $(ALL_LIBS); \
fi
.PHONY: all shlib-clean
shlib-clean:
@rm -Rf .libs _libs
@rm -f $(OBJECTS) symbols.rds
## FIXME: why not Rscript?
symbols.rds: $(OBJECTS)
@$(ECHO) "tools:::.shlib_objects_symbol_tables()" | \
$(R_HOME)/bin/R --vanilla --slave --args $(OBJECTS)
And this is my MakeVars file:
CXX11 = g++
CXX11FLAGS = -O2 -g $(LTO)
CXX1XPICFLAGS = -fpic
CXX11STD = -std=c++11
CXX14 = g++
CXX14STD = -std=c++14
CXX14FLAGS = -Wno-unused-variable -Wno-unused-function -fPIC
Please advise. Thanks!
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