RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Python package with helper tools for the nf-core community.
Repository to host tool-specific module files for the Nextflow DSL2 community!
Test data to be used for automated testing with the nf-core pipelines
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