spicyWorkflow provides an overview of how to use our very spicy workflow for performing analysis of highly multiplexed in situ imaging cytometry assays such as IMC, CODEX and MIBI-TOF.
spicyWorkflow can be installed from GitHub as follows.
# install.packages("devtools") devtools::install_github("SydneyBioX/spicyWorkflow")About
Perform spatial analysis of in situ cytometry data in R
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