Open source tools for NGS data analysis
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
Detect and visualize target mutations by scanning FastQ files directly
Gene fusion detection and visualization
Generate duplex/single consensus reads to reduce sequencing noises and remove duplications
A fast lossless FASTQ compressor with ultra-high compression ratio
Ultra-fast preprocessing and quality control for long-read sequencing data
TCR Repertoire Analysis and Lung Cancer Prediction
OpenGene/LungTCR’s past year of commit activity R 4 MIT 2 0 0 Updated Aug 6, 2025Python scripts to process files within a folder in parallel, with tools like fastp
OpenGene/parallel’s past year of commit activity Python 1 MIT 0 0 0 Updated Jul 6, 2025Ultra-fast preprocessing and quality control for long-read sequencing data
OpenGene/fastplong’s past year of commit activity C++ 172 MIT 9 15 0 Updated Jul 5, 2025An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
OpenGene/fastp’s past year of commit activityA fast lossless FASTQ compressor with ultra-high compression ratio
OpenGene/repaq’s past year of commit activity C 138 MIT 20 9 0 Updated May 28, 2025The shiny-based app for Fragment Analysis, especially for MSI analysis
OpenGene/ACMSI’s past year of commit activity R 7 0 0 0 Updated Jun 28, 2024Generate duplex/single consensus reads to reduce sequencing noises and remove duplications
OpenGene/gencore’s past year of commit activity C++ 123 MIT 31 41 0 Updated Oct 27, 2023An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19.
OpenGene/fastv’s past year of commit activity C++ 118 MIT 24 14 0 Updated Oct 27, 2023A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis
OpenGene/scrnapip’s past year of commit activity HTML 112 15 5 0 Updated Oct 16, 2023Loading…
You can’t perform that action at this time.
RetroSearch is an open source project built by @garambo | Open a GitHub Issue
Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo
HTML:
3.2
| Encoding:
UTF-8
| Version:
0.7.4