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Showing content from https://github.com/Marsilea-viz/marsilea below:

Marsilea-viz/marsilea: Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)

You can read the documentation on Read the Docs.

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conda install -c conda-forge marsilea
# or
mamba install -c conda-forge marsilea

When we do visualization, we often need to combine multiple plots to show different aspects of the data. For example, we may need to create a heatmap to show the expression of genes in different cells, and then create a bar chart to show the expression of genes in different cell types. A visualization contains multiple plots is called a composable visualization. In Marsilea, we employ a declarative approach for user to create composable visualization incrementally.

If you use Marsilea in your research, please cite the following:

Marsilea: an intuitive generalized paradigm for composable visualizations

Yimin Zheng, Zhihang Zheng, André F. Rendeiro & Edwin Cheung

Genome Biology 2025 Jan 06. DOI: 10.1186/s13059-017-1382-0

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