Decima is a Python library to train sequence models on single-cell RNA-seq data.
WeightsWeights of the trained Decima models (4 replicates) are now available at https://zenodo.org/records/15092691. See the tutorial for how to load and use these.
PreprintPlease cite https://www.biorxiv.org/content/10.1101/2024.10.09.617507v3. Also see https://github.com/Genentech/decima-applications for all the code used to train and apply models in this preprint.
InstallationInstall the package from PyPI,
pip install decima
Or if you want to be on the cutting edge,
pip install git+https://github.com/genentech/decima.git@mainNote
This project has been set up using BiocSetup and PyScaffold.
RetroSearch is an open source project built by @garambo | Open a GitHub Issue
Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo
HTML:
3.2
| Encoding:
UTF-8
| Version:
0.7.4
