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Evolutionary Causation: Biological and Philosophical Reflectionsedited by Tobias Uller and Kevin N. Laland (2019)
Evolution: The Extended Synthesisedited by Massimo Pigliucci and Gerd B. Müller (2010)
Laland KN, Uller T, Feldman M, Sterelny K, Müller GB, et al.Does evolutionary theory need a rethink? Nature News. 2014;514(7521):161.
Müller GB.Evo–devo: extending the evolutionary synthesis. Nature Reviews Genetics. 2007;8(12):943–49
Müller GB.Why an extended evolutionary synthesis is necessary. Interface Focus. 2017;7(5):20170015
Pigliucci M.Do we need an extended evolutionary synthesis? Evolution. 2007;61(12):2743–49
Developmental biasFurther readingClassicsMust reads Special issue: Developmental Bias in Evolution.Special issue in Evolution & Development. January-March 2020 Edited by: Armin P. Moczek
Watson RA, Szathmáry EHow Can Evolution Learn? Trends Ecol Evol. 2016;31(2):147–57.
Uller T, Moczek AP, Watson RA, Brakefield PM, Laland KNDevelopmental Bias and Evolution: A Regulatory Network Perspective. Genetics. 2018;209(4):949-966.
Wagner AThe origins of evolutionary innovations. Oxford University Press; 2011.
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Badyaev AVStress-induced variation in evolution: from behavioural plasticity to genetic assimilation. Proc R Soc B. 2005;272(1566):877–86.
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Arthur WBiased embryos and evolution. Cambridge University Press; 2004.
Brakefield PMEvo-devo and accounting for Darwin’s endless forms. Phil Trans R Soc B. 2011;366(1574):2069–75.
Developmental plasticityFurther readingClassicsMust reads Moczek AP, Sultan SE, Foster S, Ledon-Rettig C, Dworkin I, Nijhout HF, et alThe role of developmental plasticity in evolutionary innovation. Proc R Soc B. 2011;278(1719):2705–13.
Pfennig DW, Wund MA, Snell-Rood EC, Cruickshank T, Schlichting CD, Moczek APPhenotypic plasticity’s impacts on diversification and speciation. Trends Ecol Evol. 2010;25(8):459–67.
Scoville AG, Pfrender MEPhenotypic plasticity facilitates recurrent rapid adaptation to introduced predators. Proc Natl Acad Sci. 2010;107(9):4260–3.
Badyaev AVEvolutionary Significance of Phenotypic Accommodation in Novel Environments: An Empirical Test of the Baldwin Effect. Phil Trans R Soc B. 2009;364(March):1125–41.
Suzuki Y, Nijhout HFEvolution of a Polyphenism by Genetic Accommodation. Science. 2006;311(5761):650–2.
West-Eberhard MJDevelopmental plasticity and evolution. Oxford University Press; 2003.
Baldwin JMA New Factor in Evolution. Am Nat. 1896;30(354):441–51.
Waddington CHCanalization of development and genetic assimilation of acquired characters. Nature. 1959;183(4676):1654–5.
Snell-Rood EC, Van Dyken JD, Cruickshank T, Wade MJ, Moczek APToward a population genetic framework of developmental evolution: The costs, limits, and consequences of phenotypic plasticity. BioEssays. 2010;32(1):71–81.
Levis NA, Pfennig DWEvaluating “plasticity-first” evolution in nature: Key criteria and empirical approaches. Trends Ecol Evol. 2016;31(7):563–74.
Gilbert SF, Epel DEcological developmental biology: The environmental regulation of development, health, and evolution. Sinauer Associates Inc; 2015.
Inclusive inheritanceFurther readingClassicsMust reads Jablonka E, Lamb MJEvolution in Four Dimensions. Revised Ed. The MIT Press; 2014.
Heard E, Martienssen RATransgenerational epigenetic inheritance: Myths and mechanisms. Cell. 2014;157(1):95–109.
Gilbert SF, Sapp J, Tauber AIA Symbiotic View of Life: We Have Never Been Individuals. Q Rev Biol. 2012;87(4):325–41.
Bonduriansky R, Day TExtended heredity: A new understanding of inheritance and evolution. Princeton University Press; 2018.
Badyaev AV, Uller TParental effects in ecology and evolution: mechanisms, processes and implications. Phil Trans R Soc B. 2009;364(1520):1169–77.
Griffiths P, Gray RDevelopmental systems and evolutionary explanation. J Philos. 1994;91(6):277–304.
Cavalli-Sforza LL, Feldman MWCultural Transmission and Evolution: A Quantitative Approach. Princeton University Press; 1981.
Mesoudi A, Blanchet S, Charmantier A, Danchin É, Fogarty L, et alIs non-genetic inheritance just a proximate mechanism? A corroboration of the extended evolutionary synthesis. Biol Theory. 2013;7(3):189–95.
Jablonka E, Lamb MEpigenetic Inheritance and Evolution: The Lamarckian Dimension. Oxford University Press; 1999.
Day T, Bonduriansky RA unified approach to the evolutionary consequences of genetic and non-genetic inheritance. Am Nat. 2011;178(2):E18-36.
Cortijo S, Wardenaar R, Colomé-Tatché M, Gilly A, Etcheverry M, Labadie K, et alMapping the epigenetic basis of complex traits. Science. 2014;343(6175):1145–8.
Danchin É, Charmantier A, Champagne FA, Mesoudi A, Pujol B, Blanchet SBeyond DNA: integrating inclusive inheritance into an extended theory of evolution. Nat Rev Genet. 2011 Jun 17;12(7):475–86.
Niche constructionFurther readingClassicsMust reads Laland K, Matthews B, Feldman MWAn introduction to niche construction theory. Evol Ecol. 2016;30(2):191–202.
Sultan SEOrganism and Environment. Oxford University Press; 2015.
Buser CC, Newcomb RD, Gaskett AC, Goddard MRNiche construction initiates the evolution of mutualistic interactions. Ecol Lett. 2014;17(10):1257–64.
Donohue KWhy ontogeny matters during adaptation: Developmental niche construction and pleiotropy across the life cycle in Arabidopsis Thaliana. Evolution. 2014;68(1):32–47.
Laidre MENiche construction drives social dependence in hermit crabs. Curr Biol. 2012;22(20):R861-3.
Odling-Smee J, Laland KN, Feldman MWNiche Construction: The Neglected Process in Evolution. Princeton University Press; 2003.
Lewontin RCGene, Organism and Environment. In: Bendall DS, editor. Evolution From Molecules to Men. Cambridge University Press; 1986.
Waddington CHEvolutionary systems – Animal and human. Nature. 1959;183(4676):1634–8.
Scott-Phillips TC, Laland KN, Shuker DM, Dickins TE, West SAThe niche construction perspective: A critical appraisal. Evolution (NY). 2014 May;68(5):1231–43.
Flynn EG, Laland KN, Kendal RL, Kendal JRDevelopmental niche construction. Dev Sci. 2013 Mar;16(2):296–313.
Odling-Smee J, Erwin DH, Palkovacs EP, Feldman MW, Laland KNNiche Construction Theory: A Practical Guide for Ecologists. Q Rev Biol. 2013 Mar;88(1):3–28.
O’Brien MJ, Laland KNGenes, Culture, and Agriculture. Curr Anthropol. 2012 Aug;53(4):434–70.
Kendal JR, Tehrani JJ, Odling-Smee JHuman niche construction. Phil Trans R Soc B. 2011;366(1566).
Erwin DHMacroevolution of ecosystem engineering, niche construction and diversity. Trends Ecol Evol. 2008 Jun;23(6):304–10.
Laland KN, Odling-Smee FJ, Feldman MWEvolutionary consequences of niche construction and their implications for ecology. Proc Natl Acad Sci U S A. 1999 Aug 31;96(18):10242–7.
Matthews B, De Meester L, Jones CG, Ibelings BW, Bouma TJ, Nuutinen V, et al.Under niche construction: an operational bridge between ecology, evolution, and ecosystem science. Ecol Monogr. 2014;84(2):245–63.
Constructive developmentFurther readingClassicsMust reads Gerhart J, Kirschner MThe theory of facilitated variation. Proc Natl Acad Sci USA. 2007;104 Suppl:8582–9.
Fox Keller EThe mirage of a space between nature and nurture. Duke University Press; 2010.
Oyama SThe ontogeny of information: Developmental systems and evolution. Duke University Press; 2000.
Oyama S, Griffiths P, Gray RCycles of contingency: developmental systems and evolution. MIT Press; 2001.
Snell-Rood ECSelective processes in development: Implications for the costs and benefits of phenotypic plasticity. Integr Comp Biol. 2012;52(1):31–42.
West MJ, King APSettling nature and nurture into an ontogenetic niche. Dev Psychobiol. 1987;20(5):549–62.
Blakemore C, Cooper GFDevelopment of the brain depends on the visual environment. Nature. 1970;228(5270):477–8.
Whyte LLInternal factors in evolution. Tavistock Publications; 1965.
Badyaev AVOrigin of the fittest: link between emergent variation and evolutionary change as a critical question in evolutionary biology. Proc R Soc B. 2011;278(1714):1921-1929.
Bateson P, Gluckman PPlasticity, robustness, development and evolution. Cambridge University Press; 2011.
Hallgrimsson B, Hall BKEpigenetics: Linking genotype and phenotype in development and evolution. University of California Press; 2011.
Lickliter R, Harshaw CCanalization and malleability reconsidered: The developmental basis of phenotypic stability and variability. In: Handbook of developmental science, behavior, and genetics. Blackwell Publishing Ltd; 2010. p491-525.
Noble DThe music of life: biology beyond the genome. Oxford University Press; 2006.
Reciprocal causationFurther readingClassicsMust reads Gilbert SFThe morphogenesis of evolutionary developmental biology. Int J Dev Biol. 2003;47(7–8):467–77.
Griffiths P, Gray RDevelopmental systems and evolutionary explanation. J Philos. 1994;91(6):277–304.
Laland KN, Sterelny K, Odling-Smee J, Hoppitt W, Uller TCause and effect in biology revisited: Is Mayr’s proximate-ultimate dichotomy still useful? Science. 2011;334(6062):1512–6.
Laland KN, Odling-Smee J, Hoppitt W, Uller TMore on how and why: cause and effect in biology revisited. Biol Philos. 2013;28(5):719–45.
Müller GBEvo–devo: extending the evolutionary synthesis. Nat Rev Genet. 2007;8(12):943–9.
Oyama S, Griffiths P, Gray RCycles of contingency: developmental systems and evolution. MIT Press; 2001.
Lewontin RCGene, organism and environment. In: Evolution from molecules to men. Cambridge University Press; 1986.
Waddington CHEvolutionary systems: Animal and human. Nature. 1959;183(4676):1634–8.
Gottlieb GIndividual development and evolution. Oxford University Press; 1992.
Odling-Smee FJ, Laland KN, Feldman MWNiche construction: The neglected process in evolution. Princeton University Press; 2003.
Sultan SEOrganism and environment. Oxford University Press; 2015.
West-Eberhard MJDevelopmental plasticity and evolution. Oxford University Press; 2003.
Laland KN, Odling-Smee J, Hoppitt W, Uller TMore on how and why: a response to commentaries. Biol Philos. 2013;28(5):793–810.
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