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jax.numpy.histogram2d — JAX documentation

jax.numpy.histogram2d(x, y, bins=10, range=None, weights=None, density=None)[source]#

Compute a 2-dimensional histogram.

JAX implementation of numpy.histogram2d().

Parameters:

• x (ArrayLike) – one-dimensional array of x-values for points to be binned.

• y (ArrayLike) – one-dimensional array of y-values for points to be binned.

• bins (ArrayLike | list[ArrayLike]) – Specify the number of bins in the histogram (default: 10). bins may also be an array specifying the locations of the bin edges, or a pair of integers or pair of arrays specifying the number of bins in each dimension.

• range (Sequence[None | Array | Sequence[ArrayLike]] | None | None) – Pair of arrays or lists of the form [[xmin, xmax], [ymin, ymax]] specifying the range of the data in each dimension. If not specified, the range is inferred from the data.

• weights (ArrayLike | None | None) – An optional array specifying the weights of the data points. Should be the same shape as x and y. If not specified, each data point is weighted equally.

• density (bool | None | None) – If True, return the normalized histogram in units of counts per unit area. If False (default) return the (weighted) counts per bin.

Returns:

A tuple of arrays (histogram, x_edges, y_edges), where histogram contains the aggregated data, and x_edges and y_edges specify the boundaries of the bins.

Return type:

tuple[Array, Array, Array]

Examples

>>> x = jnp.array([1, 2, 3, 10, 11, 15, 19, 25])
>>> y = jnp.array([2, 5, 6, 8, 13, 16, 17, 18])
>>> counts, x_edges, y_edges = jnp.histogram2d(x, y, bins=8)
>>> counts.shape
(8, 8)
>>> x_edges
Array([ 1.,  4.,  7., 10., 13., 16., 19., 22., 25.], dtype=float32)
>>> y_edges
Array([ 2.,  4.,  6.,  8., 10., 12., 14., 16., 18.], dtype=float32)

Specifying the bin range:

>>> counts, x_edges, y_edges = jnp.histogram2d(x, y, range=[(0, 25), (0, 25)], bins=5)
>>> counts.shape
(5, 5)
>>> x_edges
Array([ 0.,  5., 10., 15., 20., 25.], dtype=float32)
>>> y_edges
Array([ 0.,  5., 10., 15., 20., 25.], dtype=float32)

Specifying the bin edges explicitly:

>>> x_edges = jnp.array([0, 10, 20, 30])
>>> y_edges = jnp.array([0, 10, 20, 30])
>>> counts, _, _ = jnp.histogram2d(x, y, bins=[x_edges, y_edges])
>>> counts
Array([[3, 0, 0],
       [1, 3, 0],
       [0, 1, 0]], dtype=int32)

Using density=True returns a normalized histogram:

>>> density, x_edges, y_edges = jnp.histogram2d(x, y, density=True)
>>> dx = jnp.diff(x_edges)
>>> dy = jnp.diff(y_edges)
>>> normed_sum = jnp.sum(density * dx[:, None] * dy[None, :])
>>> jnp.allclose(normed_sum, 1.0)
Array(True, dtype=bool)

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