Provides a comprehensive toolkit for single-cell annotation with the 'CellMarker2.0' database (see Xia Li, Peng Wang, Yunpeng Zhang (2023) <doi:10.1093/nar/gkac947>). Streamlines biological label assignment in single-cell RNA-seq data and facilitates transcriptomic analysis, including preparation of TCGA<https://portal.gdc.cancer.gov/> and GEO<https://www.ncbi.nlm.nih.gov/geo/> datasets, differential expression analysis and visualization of enrichment analysis results. Additional utility functions support various bioinformatics workflows. See Wei Cui (2024) <doi:10.1101/2024.09.14.609619> for more details.
Version: 1.1.1 Depends: R (≥ 4.1.0) Imports: data.table, ggplot2, httr2, R6, xml2 Suggests: knitr, patchwork, rmarkdown, ggrepel, Seurat, limma, GEOquery, fgsea, edgeR, testthat (≥ 3.0.0) Published: 2025-02-12 DOI: 10.32614/CRAN.package.easybio Author: Wei Cui [aut, cre, cph] Maintainer: Wei Cui <m2c.w at outlook.com> BugReports: https://github.com/person-c/easybio/issues License: MIT + file LICENSE URL: https://github.com/person-c/easybio NeedsCompilation: no Language: en-US Citation: easybio citation info Materials: README NEWS CRAN checks: easybio results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=easybio to link to this page.
RetroSearch is an open source project built by @garambo | Open a GitHub Issue
Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo
HTML:
3.2
| Encoding:
UTF-8
| Version:
0.7.4