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CRAN: Package copyseparator

copyseparator: Assembling Long Gene Copies from Short Read Data

Assembles two or more gene copies from short-read Next-Generation Sequencing data. Works best when there are only two gene copies and read length >=250 base pairs. High and relatively even coverage are important.

Version: 1.2.0 Depends: R (≥ 3.5.0) Imports: ape, seqinr, stringr, kmer, DECIPHER, beepr, Biostrings, grDevices, doParallel, foreach, parallel Suggests: knitr, rmarkdown, testthat (≥ 3.0.0) Published: 2022-11-25 DOI: 10.32614/CRAN.package.copyseparator Author: Lei Yang Maintainer: Lei Yang <leiyangslu at gmail.com> BugReports: https://github.com/LeiYang-Fish/copyseparator/issues License: GPL-2 URL: https://github.com/LeiYang-Fish/copyseparator NeedsCompilation: no Materials: NEWS CRAN checks: copyseparator results Documentation: Downloads: Linking:

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