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CRAN: Package adaptiveGPCA

adaptiveGPCA: Adaptive Generalized PCA

Implements adaptive gPCA, as described in: Fukuyama, J. (2017) <doi:10.48550/arXiv.1702.00501>. The package also includes functionality for applying the method to 'phyloseq' objects so that the method can be easily applied to microbiome data and a 'shiny' app for interactive visualization.

Version: 0.1.3 Depends: R (≥ 3.1.0) Imports: ape (≥ 3.1.4), ggplot2 (≥ 1.0.0), shiny (≥ 1.0.0), phyloseq (≥ 1.14.0) Suggests: knitr, rmarkdown Published: 2022-12-08 DOI: 10.32614/CRAN.package.adaptiveGPCA Author: Julia Fukuyama [aut, cre] Maintainer: Julia Fukuyama <julia.fukuyama at gmail.com> License: AGPL-3 NeedsCompilation: no CRAN checks: adaptiveGPCA results Documentation: Reference manual: adaptiveGPCA.pdf Vignettes: adaptvieGPCA vignette
Downloads: Package source: adaptiveGPCA_0.1.3.tar.gz Windows binaries: r-devel: adaptiveGPCA_0.1.3.zip, r-release: adaptiveGPCA_0.1.3.zip, r-oldrel: adaptiveGPCA_0.1.3.zip macOS binaries: r-release (arm64): adaptiveGPCA_0.1.3.tgz, r-oldrel (arm64): adaptiveGPCA_0.1.3.tgz, r-release (x86_64): adaptiveGPCA_0.1.3.tgz, r-oldrel (x86_64): adaptiveGPCA_0.1.3.tgz Old sources: adaptiveGPCA archive Reverse dependencies: Reverse suggests: treeDA Linking:

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