Detection of haplotype patterns that include single nucleotide polymorphisms (SNPs) and non-contiguous haplotypes that are associated with a phenotype. Methods for implementing HTRX are described in Yang Y, Lawson DJ (2023) <doi:10.1093/bioadv/vbad038> and Barrie W, Yang Y, Irving-Pease E.K, et al (2024) <doi:10.1038/s41586-023-06618-z>.
Version: 1.2.4 Depends: R (≥ 4.0.0) Imports: fastglm, caret, parallel, methods, stats, glmnet, tune, recipes Suggests: knitr, rmarkdown Published: 2024-02-09 DOI: 10.32614/CRAN.package.HTRX Author: Yaoling Yang [aut, cre], Daniel Lawson [aut] Maintainer: Yaoling Yang <yaoling.yang at bristol.ac.uk> License: GPL-3 NeedsCompilation: no Materials: README CRAN checks: HTRX results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=HTRX to link to this page.
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