Wrapper for Stan that offers a number of in-built models to implement a hierarchical Bayesian longitudinal model for repeat observation data. Model choice selects the differential equation that is fit to the observations. Single and multi-individual models are available. O'Brien et al. (2024) <doi:10.1111/2041-210X.14463>.
Version: 1.2.1 Depends: R (≥ 4.1.0) Imports: methods, dplyr, ggplot2, purrr, Rcpp (≥ 0.12.0), RcppParallel (≥ 5.0.1), rlang, rstan (≥ 2.18.1), rstantools (≥ 2.3.1.1) LinkingTo: BH (≥ 1.66.0), Rcpp (≥ 0.12.0), RcppEigen (≥ 0.3.3.3.0), RcppParallel (≥ 5.0.1), rstan (≥ 2.18.1), StanHeaders (≥ 2.18.0) Suggests: knitr, rmarkdown, testthat (≥ 3.0.0), withr, mnormt, here, patchwork, deSolve, cowplot, mixtools, MASS Published: 2025-07-04 DOI: 10.32614/CRAN.package.hmde Author: Daniel Falster [aut, ctb], Tess O'Brien [aut, cre, cph], Fonti Kar [ctb], David Warton [aut, ctb] Maintainer: Tess O'Brien <tess_obrien at fastmail.com> BugReports: https://github.com/traitecoevo/hmde/issues License: GPL (≥ 3) URL: https://traitecoevo.github.io/hmde/ NeedsCompilation: yes SystemRequirements: GNU make Materials: README NEWS CRAN checks: hmde resultsRetroSearch is an open source project built by @garambo | Open a GitHub Issue
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