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CRAN: Package PCMBaseCpp

PCMBaseCpp: Fast Likelihood Calculation for Phylogenetic Comparative Models

Provides a C++ backend for multivariate phylogenetic comparative models implemented in the R-package 'PCMBase'. Can be used in combination with 'PCMBase' to enable fast and parallel likelihood calculation. Implements the pruning likelihood calculation algorithm described in Mitov et al. (2020) <doi:10.1016/j.tpb.2019.11.005>. Uses the 'SPLITT' C++ library for parallel tree traversal described in Mitov and Stadler (2018) <doi:10.1111/2041-210X.13136>.

Version: 0.1.11 Depends: R (≥ 3.1.0), Rcpp, methods Imports: PCMBase, data.table, abind LinkingTo: Rcpp, RcppArmadillo Suggests: testthat, knitr, rmarkdown, covr Published: 2025-05-04 DOI: 10.32614/CRAN.package.PCMBaseCpp Author: Venelin Mitov [aut, cre, cph] (<a href="https://venelin.github.io">venelin.github.io</a>) Maintainer: Venelin Mitov <vmitov at gmail.com> BugReports: https://github.com/venelin/PCMBaseCpp/issues License: GPL (≥ 3.0) URL: https://github.com/venelin/PCMBaseCpp, https://venelin.github.io NeedsCompilation: yes Citation: PCMBaseCpp citation info Materials: README NEWS CRAN checks: PCMBaseCpp results Documentation: Downloads: Reverse dependencies: Linking:

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