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CRAN: Package seqmagick

seqmagick: Sequence Manipulation Utilities

Supports reading and writing sequences for different formats (currently interleaved and sequential formats for 'FASTA' and 'PHYLIP'), file conversion, and manipulation (e.g. filter sequences that contain specify pattern, export consensus sequence from an alignment).

Version: 0.1.7 Depends: R (≥ 3.6.0) Imports: Biostrings, magrittr, stats, utils, yulab.utils (> 0.1.1) Suggests: downloader, knitr, rmarkdown, GenomicAlignments, GenomicRanges, IRanges, muscle, Rsamtools, prettydoc Published: 2024-01-09 DOI: 10.32614/CRAN.package.seqmagick Author: Guangchuang Yu [aut, cre] Maintainer: Guangchuang Yu <guangchuangyu at gmail.com> BugReports: https://github.com/YuLab-SMU/seqmagick/issues License: Artistic-2.0 URL: https://github.com/YuLab-SMU/seqmagick NeedsCompilation: no Materials: NEWS CRAN checks: seqmagick results Documentation: Downloads: Reverse dependencies: Linking:

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